{"id":46202,"date":"2023-04-19T13:20:14","date_gmt":"2023-08-29T05:33:04","guid":{"rendered":"https:\/\/www.silicloud.com\/zh\/blog\/46202-2\/"},"modified":"2024-04-30T00:14:12","modified_gmt":"2024-04-29T16:14:12","slug":"46202-2","status":"publish","type":"post","link":"https:\/\/www.silicloud.com\/zh\/blog\/46202-2\/","title":{"rendered":""},"content":{"rendered":"

\u3084\u308a\u305f\u3044\u3053\u3068<\/h1>\n

RMarkdown\u306f\u4e0b\u8a18\u306e\u3088\u3046\u306b\u3059\u308b\u3053\u3068\u3067\u3001python\u3092\u547c\u3073\u51fa\u3057\u3066\u4f7f\u3046\u3053\u3068\u304c\u51fa\u6765\u308b\u304c\u3001\u3053\u308c\u306f\u30c1\u30e3\u30f3\u30af\u6bce\u306b\uff11\u500b\u306e\u30bb\u30c3\u30b7\u30e7\u30f3\u3092\u547c\u3073\u51fa\u3057\u3066\u3044\u308b\u306e\u3067\u3001\u7d50\u679c\u306f\u4fdd\u5b58\u3055\u308c\u306a\u3044\u3002<\/p>\n

\r\n\u3053\u306e\u3088\u3046\u306b\u3059\u308b\u3068Rmarkdown\u3067python\u3092\u4f7f\u3046\u3053\u3068\u304c\u3067\u304d\u308b\r\n\r\n```<\/span>{python}\r\n<\/span>import sys\r\nver = sys.version\r\nprint(ver)<\/span>\r\n```<\/span>\u3000\r\n\r\n2.<\/span>7.13 (default, Jan 19 2017, 14:48:08) \r\n[GCC 6.3.0 20170118]\r\n\r\n\u305f\u3060\u3057\u3001\u30c1\u30e3\u30f3\u30af\u306e\u5185\u5bb9\u3092\u30d5\u30a1\u30a4\u30eb\u306b\u3057\u3066`python <\u30c1\u30e3\u30f3\u30af\u306e\u5185\u5bb9>`<\/span>\u3068\u3057\u3066\u3044\u308b\u3060\u3051\u306e\u3088\u3046\u306a\u306e\u3067\u3001\r\n\r\n```<\/span>{python}\r\n<\/span>import sys\r\nimport subprocess\r\n\r\nprint(sys.executable, sys.argv)<\/span>\r\n```<\/span>\u3000\r\n\r\n('\/usr\/bin\/python', ['\/tmp\/Rtmp2hwE4t\/chunk-code-56da38833dcb.txt'])\r\n\r\n\u30c1\u30e3\u30f3\u30af\u3092\u307e\u305f\u304c\u3063\u305f\u8a18\u8ff0\u306a\u3069\u306f\u3067\u304d\u306a\u3044\r\n\r\n```<\/span>{python}\r\n<\/span>print(ver) # \u6700\u521d\u306e\u30c1\u30e3\u30f3\u30af\u3067\u5b9a\u7fa9\u3057\u305fver \u2794 \u7121\u3044<\/span>\r\n```<\/span>\u3000\r\n\r\nTraceback (most recent call last):\r\n  File \"\/tmp\/RtmpCqNMJ1\/chunk-code-76ef3b9243de.txt\", line 1, in <module><\/span>\r\n    print(ver)\r\nNameError: name 'ver' is not defined\r\n<\/code><\/pre>\n
Jupyter\uff08IPython Kernel\uff09\u306e\u30bb\u30c3\u30b7\u30e7\u30f3\u306f\u5225\u306b\u4e0a\u3052\u3066\u304a\u304d\u3001\u3053\u308c\u306b\u63a5\u7d9a\u3057\u3066\u4f7f\u3046\u3088\u3046\u306b\u3059\u308b\u3053\u3068\u3067\u3001\u30c1\u30e3\u30f3\u30af\u3092\u4e57\u308a\u8d8a\u3048\u305f\u51e6\u7406\u304c\u53ef\u80fd\u306a\u306e\u3067\u306f\u306a\u3044\u304b\u3068\u8003\u3048\u305f\u3002<\/p>\n
\u8ffd\u8a18:2017\/11\/28
\n\u30b3\u30e1\u30f3\u30c8\u3067\u8ffd\u52a0\u60c5\u5831\u3061\u3087\u3063\u3068\u3042\u308a\u307e\u3059\u3002
\n\u30c1\u30e3\u30f3\u30af\u3092\u4e57\u308a\u8d8a\u3048\u305f\u51e6\u7406\u3092\u3059\u308b\u3001\u3068\u3044\u3046\u306e\u306f\u3001RStudio\/reticulate\u3092\u4f7f\u3046\u30b3\u30c8\u3067\u51fa\u6765\u308b\uff08\u66f4\u306b\u3001
\npy\u3068R\u306e\u9593\u3092\u307e\u305f\u304c\u3063\u305f\u51e6\u7406\u307e\u3067\u51fa\u6765\u308b\uff09\u3088\u3046\u3067\u3001\u6642\u671f\u30a2\u30c3\u30d7\u30c7\u30fc\u30c8\u3067\u306f\u305d\u308c\u304c\u30c7\u30d5\u30a9\u30eb\u30c8\u306b\u306a\u308b\u306e\u3060\u3068\u304b\u3002
\n\u4f7f\u3044\u65b9\u7b49\u3001\u8a73\u3057\u304f\u306f@yutannihilation\u3055\u3093\u306e\u30b3\u30e1\u30f3\u30c8\u3092\u53c2\u7167<\/p>\n
\u3084\u3063\u305f\u3053\u3068<\/h1>\n
\u4e0b\u8a18\u306e\u3088\u3046\u306a\u30b9\u30af\u30ea\u30d7\u30c8\u3092\u4f5c\u6210\u3057\u3066\u304a\u304d<\/p>\n
#!\/bin\/bash  -f<\/span>\r\n\r\n# \u4e0b\u8a18\uff12\u884c\u306fpyenv \u4e0a\u306b\u3042\u308b\u306e\u3067\u3053\u3046\u3057\u3066\u3044\u308b\u304c<\/span>\r\n# \u666e\u901a\u306b\u30d1\u30b9\u304c\u901a\u3063\u3066\u3044\u308b\u306a\u3089\u4e0d\u8981<\/span>\r\nsource<\/span> \/etc\/profile.d\/pyenv.sh\r\npyenv shell anaconda3-5.0.1\r\n\r\nSESSION_FILE_NAME<\/span>=<\/span>${<\/span>HOME<\/span>}<\/span>\/session.json\r\n\r\nif<\/span> [<\/span> -f<\/span> $SESSION_FILE_NAME<\/span> ]<\/span>;<\/span> then<\/span>\r\n    # session found<\/span>\r\n    jupyter run --existing<\/span> $SESSION_FILE_NAME<\/span> $1<\/span>\r\nelse<\/span>\r\n    # session start<\/span>\r\n    python -m<\/span> ipykernel_launcher -f<\/span> $SESSION_FILE_NAME<\/span> ><\/span> \/dev\/null &\r\n\r\n    # waiting for ipykernel start...<\/span>\r\n    while<\/span>  [<\/span> !<\/span> -f<\/span> $SESSION_FILE_NAME<\/span> ]<\/span>;<\/span> do\r\n        <\/span>sleep <\/span>0.2\r\n    done<\/span>\r\n\r\n    # then, run<\/span>\r\n    jupyter run --existing<\/span> $SESSION_FILE_NAME<\/span> $1<\/span>\r\nfi<\/span>\r\n\r\n<\/code><\/pre>\n
\u3053\u306e\u7528\u306b\u30aa\u30d7\u30b7\u30e7\u30f3\u3092\u8a2d\u5b9a\u3057\u3066\u304a\u304f\u3053\u3068\u3067\u3001<\/p>\n
```{r  setup, echo=FALSE}\r\n# \u3069\u3046\u3082\u3001setup\u3001\u3068\u3044\u3046\u540d\u524d\u306e\u30c1\u30e3\u30f3\u30af\u3058\u3083\u306a\u3044\u3068\u99c4\u76ee\u3063\u307d\u3044\u30fb\u30fb\uff1f\r\nlibrary(knitr)\r\nopts_chunk$set(engine.path = '\/path\/to\/jupyter_wrap.sh')\r\n```\u3000\r\n<\/code><\/pre>\n
\u3053\u3093\u306a\u611f\u3058\u3067\u3001\u30c1\u30e3\u30f3\u30af\u3092\u307e\u305f\u3044\u3067\u51e6\u7406\u3057\u3066\u304f\u308c\u308b\u306f\u305a\u3002<\/p>\n
```{python}\r\nimport sys\r\nver = sys.version\r\nprint(ver)\r\n```\u3000\r\n\r\n3.6.3 |Anaconda, Inc.| (default, Oct 13 2017, 12:02:49) \r\n[GCC 7.2.0]\r\n\r\n```{python}\r\nprint(ver) # \u6700\u521d\u306e\u30c1\u30e3\u30f3\u30af\u3067\u5b9a\u7fa9\u3057\u305fver \u2794 \u3042\u308b\uff01\r\n```\u3000\r\n\r\n3.6.3 |Anaconda, Inc.| (default, Oct 13 2017, 12:02:49) \r\n[GCC 7.2.0]\r\n<\/code><\/pre>\n
\u3053\u308c\u3063\u3066\u3064\u307e\u308aJupyter notebook\u3082ipython_kernel\u306e\u30af\u30e9\u30a4\u30a2\u30f3\u30c8\u306e\u4e00\u3064\u306b\u904e\u304e\u305a\u3001\u4f3c\u305f\u3088\u3046\u306a\u3053\u3068\u3092RMarkdown\u3067\u3084\u3063\u3066\u3044\u308b\u611f\u3058\u306a\u3093\u3058\u3083\u306a\u3044\u304b\u306a\u3002
\n\u304a\u305d\u3089\u304fpython\u4ee5\u5916\u306ekernel\u3067\u3082\u51fa\u6765\u308b\u306e\u3067\u306f\u306a\u3044\u304b\u3068\u3044\u3046\u6c17\u304c\u3059\u308b\u3002<\/p>\n
\u307e\u305f\u3001\u6b8b\u5ff5\u306a\u304c\u3089\u3001\u6a19\u6e96\u5165\u51fa\u529b\u3092\u4ecb\u3057\u305f\u3084\u308a\u53d6\u308a\u3057\u304b\u3067\u304d\u306a\u3044\u304c\u3001RStudio\/reticulate\u3092\u4f7f\u3046\u3053\u3068\u3067\u3001python\u306e\u30aa\u30d6\u30b8\u30a7\u30af\u30c8\u3084\u3001\u56f3\u306a\u3069\u3082\u3084\u308a\u53d6\u308a\u51fa\u6765\u308b\u304b\u3082\u3057\u308c\u306a\u3044\u3002
\n\u53c2\u8003\uff1ahttps:\/\/stackoverflow.com\/questions\/36437028\/rstudio-with-python-matplotlib-graph<\/p>\n
Pandas DataFrame\u3068\u3001R\u306eDataFrame\u306e\u9593\u306fArrow\u3068\u304bFeather\u3068\u304b\u3067\u3067\u304d\u305d\u3046\u3002<\/p>\n
\u306a\u3093\u3067\u308f\u3056\u308f\u3056RMarkdown\u3092\uff1f\u3068\u601d\u3046\u304b\u3082\u3057\u308c\u306a\u3044\u304c\u3001git\u3068\u306e\u76f8\u6027\u3068\u304b\u3092\u8003\u3048\u308b\u3068RMarkdown\u3044\u3044\u306a\u30fc\u3067\u3082\u3001python\u306e\u307b\u3046\u304c\u60c5\u5831\u591a\u3044\u3057\u3001\u51fa\u6765\u308b\u3053\u3068\u3082\u9055\u3044\u305d\u3046\u3060\u306a\u30fc\u3068\u601d\u3063\u3066\u8272\u3005\u3068\u8abf\u3079\u3066\u3044\u305f\u306e\u3067\u3057\u305f\u3002
\ntidyverse\u3068pipeR\u306f\u9762\u767d\u3044\u3067\u3059\u3001\u30ef\u30f3\u30e9\u30a4\u30ca\u30fc\u597d\u304d\u306b\u306f\u305f\u307e\u3089\u306a\u3044\u30fb\u30fb\u30fb\u3002<\/p>\n
\u88dc\u8db3\uff11<\/h2>\n
\u6700\u521d\u306b\u8abf\u3079\u305f\u306e\u306f\u3001Jupyter\u306e\u30bb\u30c3\u30b7\u30e7\u30f3\u306b\u63a5\u7d9a\u3059\u308b\u65b9\u6cd5\u3002
\n\u8abf\u3079\u305f\u3068\u3053\u308d\u3001Jupyter\u306e\u30bb\u30c3\u30b7\u30e7\u30f3\u306b\u63a5\u7d9a\u3059\u308b\u3068\u306f\u3053\u306e\u3088\u3046\u306a\u611f\u3058\u3067\u3042\u308b\u3002<\/p>\n
$ <\/span>jupyter console # notebook \u3067\u306f\u306a\u304f\u3001console\u3067\u8d77\u52d5<\/span>\r\n<\/code><\/pre>\n
\u3068\u3057\u3066<\/p>\n
jupyter console \r\n\r\nJupyter console 5.2.0\r\n\r\nPython 3.6.3 |Anaconda, Inc.| (default, Oct 13 2017, 12:02:49)\r\nType 'copyright', 'credits' or 'license' for more information\r\nIPython 6.1.0 -- An enhanced Interactive Python. Type '?' for help.\r\n\r\nIn [1]: %connect_info\r\n{\r\n  \"shell_port\": 33095,\r\n  \"iopub_port\": 56161,\r\n  \"stdin_port\": 60865,\r\n  \"control_port\": 41975,\r\n  \"hb_port\": 45665,\r\n  \"ip\": \"127.0.0.1\",\r\n  \"key\": \"7cec19ae-ae48a07596105f9c998f369e\",\r\n  \"transport\": \"tcp\",\r\n  \"signature_scheme\": \"hmac-sha256\",\r\n  \"kernel_name\": \"\"\r\n}\r\n\r\nPaste the above JSON into a file, and connect with:\r\n    $> jupyter <app> --existing <file>\r\nor, if you are local, you can connect with just:\r\n    $> jupyter <app> --existing kernel-12421.json\r\nor even just:\r\n    $> jupyter <app> --existing\r\nif this is the most recent Jupyter kernel you have started.\r\n\r\nIn [2]: a=10\r\n<\/code><\/pre>\n
\u30e1\u30c3\u30bb\u30fc\u30b8\u306b\u3042\u308b\u901a\u308a\u3001\u5225\u306e\u30b7\u30a7\u30eb\u306a\u3069\u304b\u3089<\/p>\n
$ <\/span>jupyter console --existing<\/span>\r\n<\/code><\/pre>\n
\u3068\u3059\u308b\u3068\u3001\u5225\u306eipython console\u304c\u7acb\u3061\u4e0a\u304c\u308a\u3001\u5148\u7a0b\u306e\u30bb\u30c3\u30b7\u30e7\u30f3\u3067\u5b9a\u7fa9\u3057\u305fa\u3092\u898b\u308b\u3053\u3068\u304c\u51fa\u6765\u308b\u3002<\/p>\n
\r\nJupyter console 5.2.0\r\n\r\nPython 3.6.3 |Anaconda, Inc.| (default, Oct 13 2017, 12:02:49)\r\nType 'copyright', 'credits' or 'license' for more information\r\nIPython 6.1.0 -- An enhanced Interactive Python. Type '?' for help.\r\n\r\nIn [1]: a\r\nOut[2]: 10\r\n<\/code><\/pre>\n
console\u3067\u306f\u306a\u304f\u3066\u3001\u30b9\u30af\u30ea\u30d7\u30c8\u30d5\u30a1\u30a4\u30eb\u3092\u6e21\u3057\u305f\u308a\u3057\u3066\u5b9f\u65bd\u3057\u305f\u3044\u5834\u5408\u306f<\/p>\n
$ <\/span>jupyter run --existing<\/span> - <\u30d5\u30a1\u30a4\u30eb\u540d>\r\n<\/code><\/pre>\n
\u3068\u3059\u308b\u3053\u3068\u3067\u3067\u304d\u305f\u3002<\/p>\n
\u88dc\u8db3\uff12<\/h2>\n
\u3053\u3053\u307e\u3067\u8abf\u3079\u3066\u3001\u5b9f\u969b\u306b\u3084\u3063\u305f\u3053\u3068\u3068\u540c\u3058\u3088\u3046\u306b\u3001python\u306e\u5b9f\u884c\u30d1\u30b9\u3068\u30aa\u30d7\u30b7\u30e7\u30f3\u3067\u5bfe\u51e6\u3057\u3088\u3046\u3068\u3057\u305f\u6240\u3001\u5e7e\u3064\u304b\u4e0a\u624b\u304f\u884c\u304b\u306a\u3044\u3053\u3068\u304c\u3042\u3063\u305f\u3002<\/p>\n
–existing\u306e\u5f8c\u3092\u7a7a\uff08-\uff09\u306b\u3057\u3066\u6e21\u3059\u306e\u304c\u4f55\u6545\u304b\u3046\u307e\u304f\u3044\u304b\u306a\u3044<\/p>\n
\u2794 \u660e\u793a\u7684\u306b\u30bb\u30c3\u30b7\u30e7\u30f3\u30d5\u30a1\u30a4\u30eb\u3092\u4f5c\u6210\u3059\u308b\uff08run -f \u30aa\u30d7\u30b7\u30e7\u30f3\uff09\u3092\u4f7f\u3046\u3053\u3068\u306b<\/p>\n
Jupyter\u306e\u8d77\u52d5\u3082\u3064\u3044\u3067\u306b\u3084\u3063\u3061\u3083\u308d\u3046\u3068\u3001jupyter_wrap.sh\u306e\u3088\u3046\u306a\u7269\u3092\u4f5c\u3063\u305f\u306e\u3060\u304c\u3001\u8272\u3005\u8a66\u3057\u3066\u898b\u305f\u3068\u3053\u308d\u3069\u3046\u3057\u3066\u3082jupyter run\u304c\u89aa\u30d7\u30ed\u30bb\u30b9\u3068\u4e00\u7dd2\u306b\u6b7b\u3093\u3067\u3057\u307e\u3046\uff08\u89aa\u30d7\u30ed\u30bb\u30b9\u304c\u306a\u304f\u306a\u3063\u305f\u3053\u3068\u3092\u691c\u51fa\u3057\u3066\u81ea\u52d5\u7684\u306b\u30b7\u30e3\u30c3\u30c8\u30c0\u30a6\u30f3\u3057\u305f\u304b\u306e\u3088\u3046\u306a\u30e1\u30c3\u30bb\u30fc\u30b8\u304c\u51fa\u308b\uff09\u306e\u3067\u3001ipython_kernel\u3092\u76f4\u63a5\u7acb\u3061\u4e0a\u3052\u305f\u3068\u3053\u308d\u3001\u4e0a\u624b\u304f\u884c\u3063\u305f\u3002<\/p>\n
\u306a\u304a\u3001ipython_kenel\u3092\u7d42\u4e86\u3059\u308b\u306b\u306f\u3001RMarkdown\u3067<\/p>\n
```{python}\r\nquit()\r\n```\u3000\r\n<\/code><\/pre>\n
\u3068\u3059\u308b\u304b\u3001\u30b7\u30a7\u30eb\u304b\u3089jupyter console\u306a\u3069\u3067\u63a5\u7d9a\u3057\u3066\u3001<\/p>\n
In [1]:  quit\r\n<\/code><\/pre>\n
\u3068\u3059\u308b\u3002<\/p>\n
R\u306e\u30bb\u30c3\u30b7\u30e7\u30f3\u3092\u30ea\u30b9\u30bf\u30fc\u30c8\u3057\u305f\u3068\u304d\u3068\u304b\u306b\u3001\u4e00\u7dd2\u306b\u6d88\u3048\u3066\u304f\u308c\u305f\u308a\u306f\u3057\u306a\u3044\u3002<\/p>\n","protected":false},"excerpt":{"rendered":"
\u3084\u308a\u305f\u3044\u3053\u3068 RMarkdown\u306f\u4e0b\u8a18\u306e\u3088\u3046\u306b\u3059\u308b\u3053\u3068\u3067\u3001python\u3092\u547c\u3073\u51fa\u3057\u3066\u4f7f\u3046\u3053\u3068\u304c\u51fa\u6765\u308b\u304c\u3001\u3053\u308c\u306f\u30c1 […]<\/p>\n","protected":false},"author":5,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-46202","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"yoast_head":"\n- Blog - Silicon Cloud<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.silicloud.com\/zh\/blog\/46202-2\/\" \/>\n<meta property=\"og:locale\" content=\"zh_CN\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:description\" content=\"\u3084\u308a\u305f\u3044\u3053\u3068 RMarkdown\u306f\u4e0b\u8a18\u306e\u3088\u3046\u306b\u3059\u308b\u3053\u3068\u3067\u3001python\u3092\u547c\u3073\u51fa\u3057\u3066\u4f7f\u3046\u3053\u3068\u304c\u51fa\u6765\u308b\u304c\u3001\u3053\u308c\u306f\u30c1 […]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.silicloud.com\/zh\/blog\/46202-2\/\" \/>\n<meta property=\"og:site_name\" content=\"Blog - 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